bioshake-0.1.0.0: Bioinformatics pipelines with shake
Bioshake.Samtools
Synopsis
addRGLine :: String -> AddRGLine () Source #
sortBam :: Implicit Threads => SortBam Threads Source #
mappedOnly :: Implicit Threads => MappedOnly Threads Source #
pileup :: Pileup () Source #
deDup :: DeDup () Source #
bedCov :: BedCov () Source #
Computes coverage for each capture region